Vocabularies

01

Public version of COVoc - the COVID-19 controled vocabulary

SIB experts and resources are taking part in the global effort to develop dedicated data services, analysis tools and improve knowledge sharing to fight the COVID-19 pandemic. Including the "COVoc" COVID-19 controlled vocabulary

https://docs.google.com/spreadsheets/d/1Hddg2dwl_H6iyhVCY10qyV6gTyFHafc646DeWi5jntI/edit#gid=1391555866

02

EMERSE COVID-19 Synonyms

These terms have been incorporated into the overall EMERSE Synonyms dataset but are being made available here without licensing restrictions to help with the current pandemic. 

http://project-emerse.org/synonyms_covid19.html

03

Coronavirus Infectious Disease Ontology

The Ontology of Coronavirus Infectious Disease (CIDO) is a community-driven open-source biomedical ontology in the area of coronavirus infectious disease. The CIDO is developed to provide standardized human- and computer-interpretable annotation and representation of various coronavirus infectious diseases, including their etiology, transmission, pathogenesis, diagnosis, prevention, and treatment.

https://bioportal.bioontology.org/ontologies/CIDO

04

SARS-CoV-2 and COVID-19 related LOINC terms

This page contains LOINC terms that are related to SARS coronavirus 2 (SARS-CoV-2) and COVID-19. We are providing this page as a single source for all SARS-CoV-2/COVID-19 LOINC content. Note that the contents will be updated as new terms are created and pre-released, so check back frequently for the latest contents.

https://loinc.org/sars-cov-2-and-covid-19/

05

COVID-19 related clinical codes

This list maintained by Robert Murphy, MD, University of Texas Health Science Center. It containes  COVID-19 related clinical codes including ICD-10, CPT, HCPCS, SNOMED_CT, Proposed SNOMED code, SNOMED to ICD10 Mapping, and LONIC. 

https://drive.google.com/file/d/1b1WjALh_Yq9tO_CaeQJPdG1ttqLTHf9m/view?usp=sharing

06

ACT-COVID-Ontology

This includes a list of resources related with COVID such as ACT CVOID ontology in i2b2, COVID-19 case definitions from CDC, and N3C Phenotype & Data Acquisition Workstream.

https://github.com/shyamvis/ACT-COVID-Ontology

© 2020